Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008648.1 Corchorus capsularis cultivar CVL-1 contig08669, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35674

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6092--6116
6
4.2
6
100
0
50
52
32
0
16
1.44
14797--14831
2
17.5
2
100
0
70
48
0
0
51
1.00
20978--21055
15
5.8
13
74
19
72
57
10
0
32
1.32
20978--21056
26
3.0
26
76
8
90
58
10
0
31
1.31
20924--21061
18
7.9
18
66
16
67
59
8
1
30
1.36
21229--21278
15
3.5
15
84
10
61
58
12
0
30
1.34
21560--21643
25
3.4
25
88
3
118
38
0
27
34
1.57
21722--21765
21
2.1
21
95
0
79
34
6
40
18
1.77
24764--24809
13
3.4
14
80
17
53
43
0
17
39
1.49
24802--24828
2
13.5
2
100
0
54
51
0
0
48
1.00
30156--30191
19
1.9
18
88
5
54
41
2
22
33
1.68

Tables:   1

The End!