Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008656.1 Corchorus capsularis cultivar CVL-1 contig08677, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8003

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2066--2141
27
2.8
28
86
5
104
18
15
21
44
1.86
4984--5075
47
2.0
47
80
4
105
41
6
11
40
1.68
5696--6101
55
7.3
55
90
2
582
49
8
18
23
1.74
5696--6101
166
2.4
166
89
2
629
49
8
18
23
1.74
6178--6221
22
1.9
24
90
9
74
43
4
20
31
1.72
6424--6693
22
12.3
21
70
14
129
55
7
20
17
1.64
6434--6644
43
4.8
42
73
15
142
56
7
20
16
1.63
6496--6702
114
1.8
112
82
4
263
56
8
18
16
1.66
6608--6704
21
4.5
22
75
21
80
53
7
18
20
1.68

Tables:   1

The End!