Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008660.1 Corchorus capsularis cultivar CVL-1 contig08681, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34641

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
248--277
6
5.0
6
100
0
60
66
16
0
16
1.25
2149--2187
20
2.0
20
85
5
53
28
23
5
43
1.75
8112--8156
18
2.4
19
85
10
58
75
4
20
0
0.97
19696--20206
120
4.3
120
85
6
589
40
12
17
29
1.87
20443--20485
19
2.2
20
83
4
52
51
6
4
37
1.50
33174--33201
14
2.0
14
100
0
56
35
14
35
14
1.86

Tables:   1

The End!