Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008662.1 Corchorus capsularis cultivar CVL-1 contig08683, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17275

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
227--270
19
2.3
19
100
0
88
15
11
36
36
1.84
1487--1579
27
3.4
27
87
0
123
41
25
18
13
1.88
1511--1590
27
3.0
27
90
0
124
40
27
20
12
1.88
5647--5680
17
2.0
17
100
0
68
29
5
35
29
1.81
5795--5833
18
2.2
18
86
13
55
35
15
20
28
1.93
9270--9297
13
2.2
13
100
0
56
53
0
7
39
1.28
10590--11164
155
3.7
155
86
3
798
29
16
21
32
1.95
11473--11544
28
2.6
28
97
0
135
30
18
26
25
1.98
15029--15063
16
2.2
16
94
0
61
34
11
48
5
1.63
16900--16931
15
2.1
15
94
0
55
40
9
6
43
1.62

Tables:   1

The End!