Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008664.1 Corchorus capsularis cultivar CVL-1 contig08685, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18429

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1675--1837
89
1.8
89
89
2
256
39
17
19
23
1.92
2242--2409
31
5.5
31
70
13
152
32
22
19
25
1.97
2241--2408
60
2.8
60
91
0
282
32
22
19
25
1.97
2441--2511
31
2.3
31
95
0
124
23
18
16
40
1.90
2472--2630
59
2.7
60
88
3
232
27
20
16
35
1.94
3705--3744
19
2.0
20
85
9
55
37
12
0
50
1.41
8333--8395
27
2.2
29
83
5
85
76
3
15
4
1.09
8550--8589
20
2.0
20
90
0
62
27
12
27
32
1.93
11374--11404
6
5.2
6
96
0
53
29
32
19
19
1.96
11963--12004
18
2.3
18
80
11
50
33
2
2
61
1.21
11965--12011
19
2.6
18
83
6
58
34
4
2
59
1.29
13010--13495
167
2.9
163
79
4
542
28
15
17
38
1.90

Tables:   1

The End!