Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008665.1 Corchorus capsularis cultivar CVL-1 contig08686, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22314

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2677--2710
17
2.0
17
94
0
59
23
5
14
55
1.61
4277--4302
3
8.7
3
100
0
52
69
0
0
30
0.89
7244--7320
32
2.3
34
86
8
122
31
15
22
31
1.95
7920--7996
32
2.3
34
84
8
113
31
15
23
29
1.95
7854--8080
126
1.8
126
89
3
359
31
14
16
37
1.88
8772--8797
2
13.0
2
100
0
52
50
0
0
50
1.00
17288--18091
428
1.9
428
83
3
1039
32
14
13
40
1.84
18162--18237
29
2.5
29
77
12
73
34
22
13
30
1.92
18944--18977
10
3.4
10
83
0
50
26
44
0
29
1.55
19395--19456
31
2.0
31
100
0
124
16
3
25
54
1.56

Tables:   1

The End!