Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008671.1 Corchorus capsularis cultivar CVL-1 contig08692, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24005

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
114--401
49
5.9
49
80
4
287
23
28
15
32
1.95
114--450
49
6.9
49
78
4
279
23
27
16
32
1.95
9061--9116
24
2.3
24
90
6
87
55
12
28
3
1.54
10041--10113
2
37.5
2
72
15
55
43
5
4
46
1.45
10021--10105
42
2.0
42
93
0
143
38
7
8
45
1.61
13674--13715
20
2.0
21
86
4
59
21
14
2
61
1.43
13880--13915
19
1.9
18
88
5
54
41
2
22
33
1.68
15176--15212
15
2.4
16
90
4
58
27
5
8
59
1.48
15177--15212
16
2.3
15
90
4
54
27
2
8
61
1.39
15778--15835
30
1.9
30
83
13
75
50
0
6
43
1.29
21140--21216
38
2.0
38
100
0
154
33
12
18
35
1.89
22367--22798
30
14.2
30
89
2
594
34
16
16
32
1.92
22367--22798
61
7.1
60
90
1
594
34
16
16
32
1.92
22367--22798
91
4.7
90
89
2
598
34
16
16
32
1.92

Tables:   1

The End!