Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008675.1 Corchorus capsularis cultivar CVL-1 contig08696, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8635

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1729--2146
209
2.0
208
87
4
601
42
17
11
27
1.85
3660--3735
6
13.8
6
73
22
69
27
51
19
1
1.55
3660--3735
16
4.3
17
75
19
75
27
51
19
1
1.55
3670--3730
22
2.8
23
78
9
74
29
49
19
1
1.58
3901--3973
31
2.4
31
74
4
76
26
5
10
57
1.54
4500--4542
15
2.8
16
85
7
61
37
39
16
6
1.75
4982--5047
30
2.2
30
84
7
82
40
6
16
36
1.73
5571--5603
14
2.3
15
94
5
59
9
24
0
66
1.20
6308--6354
3
15.7
3
100
0
94
31
0
0
68
0.90
8550--8593
2
23.0
2
90
9
74
52
0
0
47
1.00

Tables:   1

The End!