Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008677.1 Corchorus capsularis cultivar CVL-1 contig08698, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6726

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
890--940
26
2.0
26
84
0
66
31
5
17
45
1.72
3914--3946
6
5.5
6
100
0
66
66
0
15
18
1.25
4007--4150
22
6.5
22
77
14
129
37
11
10
40
1.76
4007--4150
44
3.3
43
83
6
164
37
11
10
40
1.76
5120--5153
3
11.3
3
100
0
68
67
0
0
32
0.91
6368--6410
21
2.0
22
86
4
61
20
39
6
32
1.80

Tables:   1

The End!