Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008678.1 Corchorus capsularis cultivar CVL-1 contig08699, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34112

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6600--6641
14
2.8
16
75
14
52
38
11
9
40
1.75
6632--6666
15
2.4
15
95
4
63
25
17
8
48
1.75
9986--10022
17
2.2
17
95
0
65
21
37
13
27
1.91
22582--22618
17
2.2
17
95
0
65
21
37
13
27
1.91
25094--25141
24
2.0
24
88
8
71
0
25
6
68
1.12
25699--25734
2
18.0
2
100
0
72
50
0
0
50
1.00
32721--32765
2
22.0
2
95
4
81
48
2
0
48
1.13

Tables:   1

The End!