Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008679.1 Corchorus capsularis cultivar CVL-1 contig08700, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33684

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3063--3127
29
2.2
29
81
10
69
38
15
20
26
1.92
7453--7509
29
2.0
29
92
0
96
21
26
19
33
1.97
10421--11398
487
2.0
487
99
0
1938
39
16
13
31
1.86
17214--17254
2
22.0
2
85
14
61
46
0
0
53
1.00
18891--18983
23
3.8
23
75
21
91
50
5
5
38
1.48
18998--19036
13
2.7
15
88
7
55
61
7
0
30
1.24
19211--19257
2
24.0
2
86
4
69
51
0
4
44
1.21
20822--20865
23
1.9
23
95
0
79
18
29
9
43
1.80
21829--22195
182
2.0
182
99
0
725
34
18
17
29
1.94
25931--26172
126
1.9
120
85
10
324
37
19
21
21
1.94
30194--30272
33
2.4
33
95
0
140
20
39
29
11
1.87
30194--30290
33
2.9
33
89
3
106
21
39
27
11
1.88

Tables:   1

The End!