Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008681.1 Corchorus capsularis cultivar CVL-1 contig08702, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30112

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--205
49
4.2
49
92
0
311
21
28
18
32
1.96
1651--1690
13
3.1
13
85
0
53
45
15
15
25
1.84
1683--1713
11
2.8
11
90
0
53
32
9
22
35
1.87
2429--2474
6
7.8
6
85
4
58
10
19
32
36
1.87
2435--2475
17
2.4
17
87
4
55
12
21
31
34
1.91
3326--3368
3
15.0
3
90
9
72
34
0
0
65
0.93
3758--3795
11
3.5
11
89
10
51
39
0
2
57
1.12
14442--14467
2
13.0
2
100
0
52
0
0
50
50
1.00
17799--17841
21
2.1
21
91
4
70
44
4
27
23
1.73
20468--20672
102
2.0
102
98
0
392
22
9
28
39
1.86
21564--21603
18
2.2
18
86
4
53
45
5
20
30
1.72
26939--26981
10
4.0
10
77
16
50
11
48
27
11
1.74
28363--28481
33
3.5
33
82
8
134
7
26
42
23
1.81

Tables:   1

The End!