Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008683.1 Corchorus capsularis cultivar CVL-1 contig08704, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22023

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30--203
31
5.9
31
75
17
138
25
34
31
8
1.86
13--250
27
8.3
27
75
12
190
25
34
31
8
1.86
13--250
58
4.1
58
80
10
247
25
34
31
8
1.86
13--217
115
1.8
113
85
6
272
25
34
31
8
1.86
1171--1281
17
6.7
17
83
5
147
30
30
13
25
1.94
12852--12882
7
4.6
7
96
4
55
0
9
0
90
0.46
13687--13765
7
11.1
7
97
2
149
13
13
0
72
1.13
17468--17492
2
12.5
2
100
0
50
52
0
0
48
1.00
21000--21057
27
2.1
27
90
0
89
43
3
22
31
1.70
21011--21064
27
2.0
27
100
0
108
37
3
25
33
1.74

Tables:   1

The End!