Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000869.1 Corchorus capsularis cultivar CVL-1 contig00869, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12528

Tables:   1   

This is table  1  of  1  ( 4 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
269--304
18
1.9
19
88
5
56
33
0
8
58
1.28
4541--4585
21
2.1
21
87
0
63
13
37
8
40
1.76
9117--9463
173
2.0
175
89
3
531
33
5
24
36
1.79
12221--12269
25
2.0
25
88
4
73
32
30
0
36
1.58

Tables:   1

The End!