Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008702.1 Corchorus capsularis cultivar CVL-1 contig08723, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20768

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1152--1183
11
2.9
11
90
0
55
43
18
0
37
1.51
1522--1572
3
17.0
3
95
0
93
33
1
0
64
1.05
3596--3724
63
2.0
63
100
0
258
38
22
6
32
1.79
3600--3739
63
2.2
63
94
1
246
39
22
5
33
1.76
9780--9862
31
2.9
28
81
15
89
67
2
8
21
1.29
10290--10320
16
1.9
16
93
0
53
41
12
3
41
1.59
11339--11423
19
4.6
19
74
11
86
28
2
14
55
1.51
15414--15445
11
2.9
11
90
0
55
37
0
18
43
1.51
16796--16858
6
10.7
6
91
1
101
33
3
14
49
1.59
16876--16905
15
2.0
15
93
0
51
13
10
6
70
1.34
20708--20740
7
4.7
7
100
0
66
72
0
27
0
0.85

Tables:   1

The End!