Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008705.1 Corchorus capsularis cultivar CVL-1 contig08726, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26204

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5857--5917
30
2.2
28
80
13
72
45
14
3
36
1.62
5865--5924
30
2.0
30
93
0
102
41
18
3
36
1.67
13135--13774
46
13.9
46
91
1
978
30
24
9
35
1.88
19996--20046
24
2.1
24
92
0
84
19
21
9
49
1.77
20712--20763
26
2.0
26
100
0
104
38
15
34
11
1.83
20713--20771
26
2.3
26
93
0
100
40
16
32
10
1.82
22461--22515
15
3.9
14
78
9
58
47
7
10
34
1.66
22459--22521
14
4.4
14
74
4
54
44
6
9
39
1.62
25209--25317
44
2.5
44
87
4
157
29
22
18
30
1.97

Tables:   1

The End!