Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008709.1 Corchorus capsularis cultivar CVL-1 contig08730, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29460

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1588--1645
28
2.0
29
96
3
109
50
17
6
25
1.71
5620--5644
6
4.2
6
100
0
50
48
0
16
36
1.46
8249--8354
32
3.4
31
84
3
131
16
10
35
37
1.82
8531--8571
22
1.9
22
85
5
57
17
9
19
53
1.70
8576--8626
15
3.2
16
83
10
61
7
7
27
56
1.55
8779--8845
35
1.9
35
90
6
109
53
19
7
19
1.68
15320--15370
25
2.0
25
96
0
93
49
3
21
25
1.67
27886--27920
11
3.1
11
91
4
52
60
0
0
40
0.97

Tables:   1

The End!