Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008711.1 Corchorus capsularis cultivar CVL-1 contig08732, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29419

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18--55
10
4.0
10
83
10
53
23
0
0
76
0.79
51--127
39
1.9
40
84
10
104
33
1
9
55
1.39
76--168
11
7.1
14
65
22
58
33
2
8
55
1.42
107--174
26
2.6
26
86
9
102
33
1
10
54
1.43
57--168
11
9.0
13
66
26
57
33
1
8
56
1.41
184--242
25
2.4
25
91
5
95
40
0
23
35
1.55
3494--3527
6
5.7
6
86
13
52
85
11
2
0
0.71
7651--7700
26
1.9
26
91
0
82
16
24
18
42
1.89
7889--7966
29
2.7
29
78
6
95
41
15
24
19
1.90
8996--9029
7
4.9
7
100
0
68
14
14
29
41
1.86
9100--9125
12
2.2
12
100
0
52
42
0
34
23
1.54
14854--14887
3
11.3
3
93
0
59
32
2
0
64
1.08
15636--15676
21
2.0
21
95
0
73
56
14
7
21
1.63

Tables:   1

The End!