Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008717.1 Corchorus capsularis cultivar CVL-1 contig08738, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19619

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7428--7492
33
2.0
33
93
6
114
50
0
0
49
1.00
7428--7490
11
5.9
11
74
22
55
50
0
0
49
1.00
8536--8633
22
4.5
21
77
15
83
39
21
6
32
1.78
8713--8754
22
1.9
22
95
0
75
40
14
11
33
1.82
8844--8928
22
3.9
21
74
11
64
37
10
12
38
1.79
9363--9427
30
2.1
31
97
2
123
47
3
20
29
1.65
9795--9842
24
1.9
26
83
8
64
56
0
0
43
0.99
10317--10510
83
2.3
83
87
4
284
30
18
17
34
1.94
10880--10934
16
3.1
17
77
15
58
3
20
0
76
0.94
16323--16375
26
2.0
26
100
0
106
26
24
11
37
1.89
16424--16477
26
2.1
26
100
0
108
25
12
24
37
1.91
16513--16573
28
2.2
28
93
0
104
31
1
3
63
1.20
17736--17771
3
11.7
3
88
5
54
69
0
30
0
0.89
17736--17793
7
8.9
7
88
5
52
74
0
25
0
0.82
17738--17792
10
5.3
10
74
21
51
76
0
23
0
0.79
19138--19212
27
2.8
27
89
0
105
18
14
21
45
1.85

Tables:   1

The End!