Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008722.1 Corchorus capsularis cultivar CVL-1 contig08743, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18508

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
371--445
38
2.1
37
85
7
100
37
8
22
32
1.83
1240--1318
40
2.0
40
90
5
124
31
11
13
43
1.80
1512--1590
41
1.9
41
89
0
122
27
13
15
43
1.85
1592--1628
13
2.8
13
87
0
56
32
8
43
16
1.77
1320--1865
281
1.9
283
90
2
873
33
19
15
31
1.93
1882--1926
13
3.5
13
90
0
72
13
44
6
35
1.70
1671--2099
233
1.8
234
93
0
743
30
22
11
34
1.90
2026--2107
41
2.0
41
87
0
119
29
14
15
40
1.87
2106--2140
13
2.7
13
86
0
52
28
8
45
17
1.77
2175--2211
13
2.8
13
87
0
56
16
43
8
32
1.77
2243--2273
13
2.4
13
94
0
53
12
48
6
32
1.67
2433--2461
2
14.5
2
100
0
58
51
48
0
0
1.00
3042--3066
13
1.9
13
100
0
50
44
0
0
56
0.99
6464--6524
29
2.1
29
90
0
95
22
0
16
60
1.35

Tables:   1

The End!