Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008727.1 Corchorus capsularis cultivar CVL-1 contig08748, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21089

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1029--1112
32
2.6
32
83
3
107
10
38
39
11
1.77
14018--14076
29
2.0
30
86
3
84
25
20
10
44
1.83
15861--16060
100
2.0
100
98
0
382
44
13
14
29
1.82
19162--19206
13
3.3
13
80
19
56
55
0
0
44
0.99
19162--19215
22
2.5
22
100
0
108
55
0
0
44
0.99
19162--19217
16
3.8
16
79
15
75
55
0
0
44
0.99
19162--19206
6
7.7
6
77
22
51
55
0
0
44
0.99
19705--19893
104
1.9
100
80
9
222
25
11
23
39
1.89

Tables:   1

The End!