Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008728.1 Corchorus capsularis cultivar CVL-1 contig08749, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38112

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2565--2629
31
2.1
32
88
5
98
27
12
4
55
1.56
2940--3012
38
1.9
38
88
0
110
42
8
15
34
1.76
2919--3035
60
1.9
61
82
1
146
41
7
14
35
1.75
2904--3451
22
25.4
21
65
15
131
39
9
15
35
1.79
2904--3389
22
22.4
22
65
10
133
38
9
15
36
1.80
2979--3085
45
2.4
44
82
6
117
37
9
17
35
1.82
3297--3510
62
3.5
62
95
0
356
42
8
13
35
1.75
16219--16272
27
2.0
27
96
0
99
27
7
42
22
1.80
19337--19367
16
1.9
16
93
0
53
45
9
32
12
1.75
19683--19737
24
2.3
24
90
0
83
23
18
14
43
1.87
20371--20442
29
2.5
28
82
8
81
23
13
26
36
1.93
22615--22920
155
2.0
156
84
1
409
33
17
17
31
1.93
23988--24021
15
2.3
15
89
0
50
58
0
8
32
1.29
26914--26955
22
2.0
21
85
4
57
59
4
4
30
1.39
36177--36219
22
2.0
22
86
9
61
32
30
6
30
1.84

Tables:   1

The End!