Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008736.1 Corchorus capsularis cultivar CVL-1 contig08757, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7863

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
648--1221
70
8.2
70
88
1
832
28
17
26
27
1.98
648--1221
279
2.1
279
89
2
875
28
17
26
27
1.98
1659--1757
50
2.0
50
91
0
162
36
13
16
34
1.87
2030--2067
16
2.3
16
86
13
51
2
23
0
73
0.95
2026--2062
14
2.6
15
83
12
51
2
24
0
72
0.97
2626--2684
26
2.3
26
94
2
102
10
10
15
64
1.49
3356--3419
8
7.6
8
77
10
65
12
15
0
71
1.14
3344--3407
17
3.7
17
77
8
58
9
17
0
73
1.08
3345--3420
9
8.7
9
77
8
68
10
15
0
73
1.09
3358--3419
25
2.4
25
89
7
90
12
16
0
70
1.16
3356--3419
17
3.8
16
79
8
65
12
15
0
71
1.14

Tables:   1

The End!