Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008738.1 Corchorus capsularis cultivar CVL-1 contig08759, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8381

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1147--1177
16
1.9
16
93
0
53
0
0
19
80
0.71
1722--1750
2
14.5
2
100
0
58
48
0
0
51
1.00
2563--2587
8
3.1
8
100
0
50
52
12
12
24
1.72
2563--2596
16
2.1
16
88
0
50
52
8
11
26
1.67
2643--2741
40
2.4
42
83
9
125
52
8
19
20
1.70
2750--2969
22
10.1
22
78
8
182
52
5
20
21
1.65
2750--3206
78
5.5
84
80
11
363
51
5
21
21
1.68
2893--3025
28
4.9
29
69
20
106
51
6
20
21
1.68
2945--3082
35
3.7
35
72
19
127
51
5
20
22
1.68
2980--3033
21
2.5
21
87
3
81
50
7
20
22
1.73
3084--3161
21
3.7
21
83
8
104
50
7
24
17
1.73
3058--3161
42
2.4
43
95
1
183
50
6
23
20
1.72
3144--3176
17
1.9
17
93
0
57
60
6
15
18
1.54
5997--6077
15
5.7
15
71
14
55
38
0
13
48
1.43
5980--6074
40
2.4
40
92
0
163
36
0
13
49
1.43

Tables:   1

The End!