Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008746.1 Corchorus capsularis cultivar CVL-1 contig08767, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49697

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
452--482
16
1.9
16
93
0
53
12
0
0
87
0.55
9417--9528
16
7.0
17
74
11
94
50
28
13
7
1.67
9439--9528
32
2.8
32
93
0
144
52
28
13
5
1.63
9423--9528
48
2.2
48
86
0
140
51
28
13
6
1.65
9661--9719
26
2.3
25
88
8
84
40
28
8
22
1.83
9655--9786
32
4.4
30
72
17
112
40
29
7
22
1.82
21481--21514
17
2.0
17
100
0
68
47
17
5
29
1.71
27258--27294
7
5.3
7
100
0
74
43
0
43
13
1.44
30124--30155
2
16.0
2
100
0
64
50
0
0
50
1.00
31941--32560
159
3.9
159
91
0
974
24
22
21
31
1.98
36330--36373
21
2.1
21
83
8
54
54
6
4
34
1.47
36523--36564
21
2.0
21
86
4
59
21
19
23
35
1.96
37412--37441
14
2.1
14
100
0
60
33
0
23
43
1.54
38350--38389
20
2.0
20
100
0
80
55
5
10
30
1.54
48425--48490
27
2.4
27
87
7
89
42
6
3
48
1.43

Tables:   1

The End!