Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008748.1 Corchorus capsularis cultivar CVL-1 contig08769, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9778

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1034--1077
22
1.9
24
82
17
58
27
9
15
47
1.76
2317--2387
27
2.6
27
97
0
133
36
25
19
18
1.94
2707--2798
48
1.9
48
88
0
139
33
20
23
21
1.97
2936--3276
69
4.9
69
78
8
354
26
19
28
25
1.98
2915--3276
139
2.6
138
92
2
573
26
19
28
25
1.98
3800--3907
50
2.2
50
83
5
130
35
13
17
33
1.90
5343--5443
45
2.2
45
82
6
125
38
20
8
31
1.84
9227--9259
6
5.5
6
100
0
66
54
15
0
30
1.41

Tables:   1

The End!