Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008756.1 Corchorus capsularis cultivar CVL-1 contig08777, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21045

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
855--896
22
1.9
22
90
0
66
21
14
7
57
1.61
975--1272
118
2.5
119
80
12
295
35
15
11
37
1.82
1022--1284
118
2.2
120
83
10
333
35
16
11
37
1.84
4866--4900
18
1.9
18
100
0
70
20
11
22
45
1.82
10496--10766
120
2.3
119
82
5
323
29
18
14
38
1.89
18784--18855
29
2.4
31
86
4
103
38
16
26
18
1.91
20056--20678
22
28.5
22
70
9
312
38
14
9
37
1.79

Tables:   1

The End!