Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008759.1 Corchorus capsularis cultivar CVL-1 contig08780, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39701

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5332--5385
26
2.1
26
100
0
108
29
22
18
29
1.97
7991--8018
2
14.0
2
100
0
56
50
0
0
50
1.00
11224--11312
4
24.5
4
76
19
61
49
5
0
44
1.25
11224--11312
6
16.3
6
71
17
61
49
5
0
44
1.25
12304--12370
26
2.5
26
78
11
64
56
1
10
31
1.42
13349--13492
75
1.9
75
92
0
243
47
19
11
21
1.80
13534--13565
1
32.0
1
100
0
64
0
0
0
100
0.00

Tables:   1

The End!