Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008762.1 Corchorus capsularis cultivar CVL-1 contig08783, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15254

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5211--5318
33
3.3
33
84
7
139
24
40
26
8
1.83
6401--6505
33
3.2
32
81
5
129
24
9
20
45
1.80
6531--6672
33
4.3
33
90
0
212
28
10
16
43
1.82
8524--8604
30
2.7
30
92
1
126
22
41
27
8
1.82
8586--8615
12
2.5
12
94
0
51
16
36
33
13
1.88
8555--8633
42
1.9
41
84
2
104
21
39
27
11
1.88
10049--10110
32
1.9
32
90
0
97
27
22
17
32
1.97
10046--10132
32
2.7
32
80
3
95
26
20
20
32
1.97
10906--10942
13
2.9
12
88
11
56
0
37
2
59
1.12
12534--12731
27
7.3
27
95
0
342
19
42
17
20
1.89

Tables:   1

The End!