Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008763.1 Corchorus capsularis cultivar CVL-1 contig08784, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22834

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
186--231
24
1.9
24
90
0
74
23
26
26
23
2.00
660--686
6
4.5
6
100
0
54
55
14
0
29
1.40
694--722
13
2.3
13
94
5
51
65
13
6
13
1.45
1601--1625
10
2.5
10
100
0
50
24
8
20
48
1.76
6497--6569
33
2.3
31
83
9
85
58
5
12
23
1.54
7843--7867
10
2.5
10
100
0
50
24
8
20
48
1.76
8456--8495
10
3.7
12
75
25
52
67
5
5
22
1.30
10848--10877
10
3.0
10
100
0
60
0
20
50
30
1.49
10899--10997
33
3.0
32
85
4
119
9
29
37
24
1.86
16888--16950
30
2.1
30
88
5
92
30
17
33
19
1.95
18756--18818
30
2.1
30
88
5
92
30
17
33
19
1.95
20622--20684
30
2.1
30
88
5
92
30
17
33
19
1.95
22490--22552
30
2.1
30
88
5
92
30
17
33
19
1.95

Tables:   1

The End!