Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008765.1 Corchorus capsularis cultivar CVL-1 contig08786, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39951

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12185--12255
30
2.4
30
80
4
81
11
29
30
28
1.91
18859--18888
15
2.0
15
100
0
60
40
20
13
26
1.89
19827--19858
11
2.9
11
90
0
55
37
0
18
43
1.51
19827--19886
22
2.9
22
76
19
65
41
3
18
36
1.67
19837--19874
19
2.1
18
90
5
58
44
2
21
31
1.66
21216--21252
6
6.3
6
96
3
67
35
0
13
51
1.41
21565--21607
16
2.7
16
88
0
59
58
6
11
23
1.57
22689--22729
15
2.7
15
92
0
64
43
19
26
9
1.82
24122--24158
6
6.3
6
96
3
67
35
0
13
51
1.41
28168--28201
18
2.0
17
88
11
52
35
23
0
41
1.55

Tables:   1

The End!