Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008774.1 Corchorus capsularis cultivar CVL-1 contig08795, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18542

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6207--6237
15
2.1
15
93
0
53
41
12
9
35
1.76
14170--14233
27
2.5
26
80
9
69
28
26
9
35
1.87
16718--16743
2
13.0
2
100
0
52
50
0
0
50
1.00
16576--16859
142
2.0
142
96
0
523
35
11
10
42
1.76
16863--17227
22
16.7
22
67
13
137
35
13
9
41
1.77
17423--17497
25
3.4
22
78
10
64
34
13
9
42
1.76
17325--17655
22
14.9
22
67
20
102
34
17
8
38
1.81
17745--17855
44
2.5
45
77
13
115
37
15
9
36
1.81
17746--17852
22
4.8
23
78
13
100
38
14
10
37
1.80
18018--18055
19
2.0
20
85
15
53
63
2
5
28
1.30

Tables:   1

The End!