Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008781.1 Corchorus capsularis cultivar CVL-1 contig08802, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20339

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
801--863
26
2.4
25
78
19
67
46
1
6
46
1.38
1289--1506
105
2.1
106
94
1
384
33
14
15
36
1.88
1833--1860
13
2.2
13
100
0
56
28
7
17
46
1.75
8700--8740
19
2.2
19
86
4
57
0
17
2
80
0.82
10481--10631
75
2.0
75
100
0
302
41
7
7
42
1.63
12044--12073
2
15.5
2
93
6
53
53
0
0
46
1.00
17644--17685
15
2.7
15
80
16
50
9
16
33
40
1.81
19533--19666
68
2.0
69
87
1
198
34
18
15
31
1.93

Tables:   1

The End!