Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008783.1 Corchorus capsularis cultivar CVL-1 contig08804, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25160

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5370--5423
27
2.0
27
100
0
108
25
18
3
51
1.62
7542--7612
28
2.4
29
84
11
83
47
16
16
18
1.82
9803--9952
72
2.1
72
83
2
185
26
7
21
45
1.77
13970--13996
14
1.9
14
100
0
54
0
29
37
33
1.58
14903--14961
7
8.6
7
78
15
52
47
0
0
52
1.00
18541--18581
16
2.6
16
84
0
55
14
21
29
34
1.93
18768--18814
18
2.7
18
87
9
62
51
4
0
44
1.21
18831--18873
22
2.0
22
100
0
86
37
6
0
55
1.27
18835--18882
22
2.3
22
89
7
73
41
6
0
52
1.27
18913--18960
7
6.7
7
77
13
53
58
0
0
41
0.98
18928--18966
20
1.9
20
89
5
60
61
2
0
35
1.10
19240--19271
16
2.1
16
88
11
50
9
18
43
28
1.81
22953--23000
20
2.5
19
81
15
55
41
2
2
54
1.24

Tables:   1

The End!