Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008787.1 Corchorus capsularis cultivar CVL-1 contig08808, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3230

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
420--457
2
19.5
2
84
15
53
50
0
2
47
1.15
972--1076
7
13.6
8
69
23
57
26
9
1
61
1.37
1011--1077
17
3.7
18
70
18
50
28
8
1
61
1.35
1148--1203
24
2.6
22
84
15
66
25
7
1
66
1.27
1125--1199
39
1.9
39
81
5
89
28
6
2
62
1.34
1683--1718
15
2.5
14
86
8
54
0
0
11
88
0.50
1676--1743
21
3.5
20
82
9
77
8
0
11
79
0.94
1688--1756
36
1.9
35
82
2
84
8
1
13
76
1.07

Tables:   1

The End!