Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008796.1 Corchorus capsularis cultivar CVL-1 contig08817, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38412

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
798--826
1
29.0
1
100
0
58
100
0
0
0
0.00
1973--2022
23
2.2
23
96
0
91
30
12
12
46
1.77
6694--6746
24
2.2
24
93
0
88
37
7
37
16
1.78
9404--9435
8
3.9
8
95
4
55
0
37
0
62
0.95
10204--10288
43
2.0
43
85
0
116
27
14
27
31
1.94
12951--13022
29
2.4
29
84
9
101
34
18
30
16
1.93
16344--16379
5
7.2
5
93
0
63
0
2
19
77
0.88
17087--17162
6
12.7
6
98
0
125
17
19
51
11
1.76
17730--17775
20
2.2
21
88
3
67
50
15
6
28
1.69
20332--20364
5
6.6
5
96
0
57
0
54
21
24
1.45
34403--34446
19
2.4
18
88
3
61
79
0
9
11
0.93
36528--36558
13
2.5
13
94
5
55
35
16
22
25
1.94
37425--37473
10
4.9
10
94
0
71
28
4
22
44
1.71

Tables:   1

The End!