Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008797.1 Corchorus capsularis cultivar CVL-1 contig08818, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35245

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
775--863
22
4.0
22
76
11
92
37
21
8
32
1.85
958--999
22
1.9
22
95
0
75
40
14
11
33
1.82
1030--1173
22
6.6
22
73
9
107
38
11
10
39
1.76
1606--1669
31
2.1
31
94
5
114
46
3
20
29
1.66
1698--1742
5
9.0
5
85
9
65
55
0
4
40
1.20
1698--1772
10
6.8
12
78
17
51
50
0
9
40
1.35
6497--6661
52
3.0
53
82
9
156
37
26
14
21
1.92
6614--6681
30
2.3
31
80
12
79
35
30
13
20
1.91
6792--6822
2
15.5
2
100
0
62
48
0
0
51
1.00
14291--14374
7
11.0
7
86
13
105
54
26
0
19
1.44
14291--14382
8
11.9
8
86
12
122
54
25
0
20
1.45
14291--14383
23
4.0
22
85
13
125
53
25
0
20
1.45
19252--19354
52
1.9
52
82
5
125
37
25
14
22
1.92
19362--19436
30
2.5
30
100
0
150
41
28
12
18
1.86

Tables:   1

The End!