Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008802.1 Corchorus capsularis cultivar CVL-1 contig08823, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23744

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10133--10188
28
2.0
29
83
16
73
51
3
3
41
1.36
11133--11169
13
2.8
14
84
12
51
78
0
0
21
0.75
11126--11167
21
2.0
20
90
4
66
80
0
0
19
0.70
12995--13058
32
2.0
33
90
3
103
14
4
17
64
1.45
13311--13388
31
2.6
31
77
4
88
37
20
16
25
1.93
14085--14115
16
1.9
16
93
0
53
41
3
12
41
1.59
14101--14138
10
3.5
11
83
16
53
42
2
10
44
1.52
14091--14124
16
2.1
16
88
0
50
44
2
8
44
1.50
14724--14754
2
15.5
2
100
0
62
48
0
0
51
1.00
15750--15855
31
3.5
29
76
6
86
25
16
18
38
1.92
15776--15855
31
2.7
30
76
5
90
27
17
20
35
1.95
18156--18187
10
3.2
10
95
0
55
43
0
6
50
1.27
19157--19198
9
4.8
9
79
2
50
71
14
2
11
1.24
19155--19198
17
2.5
17
88
3
61
68
13
2
15
1.31
19156--19198
8
5.0
8
78
15
50
69
13
2
13
1.28

Tables:   1

The End!