Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008803.1 Corchorus capsularis cultivar CVL-1 contig08824, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8558

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2267--2304
2
19.0
2
100
0
76
50
0
0
50
1.00
3574--3611
20
1.9
19
89
5
58
31
5
13
50
1.63
4395--4442
17
2.8
17
90
0
78
43
16
10
29
1.81
8001--8071
18
3.9
17
75
15
70
5
40
14
39
1.69
7991--8067
38
2.0
38
84
0
100
7
40
12
38
1.73
8219--8275
18
3.2
18
82
0
69
57
12
0
29
1.35
8285--8326
21
2.0
21
90
0
66
54
4
0
40
1.21

Tables:   1

The End!