Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008806.1 Corchorus capsularis cultivar CVL-1 contig08827, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27327

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3756--3805
22
2.2
23
89
7
75
54
0
4
42
1.19
6558--6585
1
28.0
1
100
0
56
100
0
0
0
0.00
10326--10363
2
20.0
2
89
10
62
52
0
0
47
1.00
12402--12769
109
3.5
106
91
4
577
42
8
8
40
1.66
15144--15188
2
22.5
2
100
0
90
51
0
0
48
1.00
17151--17197
22
2.1
22
84
7
60
61
2
12
23
1.42
17081--17348
98
3.0
84
85
11
347
50
1
14
33
1.54
17173--17348
85
2.0
86
89
7
266
49
2
14
34
1.56
18473--18503
13
2.4
13
100
0
62
25
6
0
67
1.14
18578--18653
21
3.5
21
89
7
116
60
10
2
26
1.43
18570--18642
23
3.3
23
90
7
123
58
8
2
30
1.41
18570--18653
44
1.9
44
95
0
150
59
9
2
28
1.41
21258--21295
2
20.0
2
86
10
53
52
2
0
44
1.14
21262--21292
11
2.8
11
95
0
53
54
3
0
41
1.16
22468--22517
26
2.0
26
96
4
93
46
0
4
50
1.20

Tables:   1

The End!