Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008829.1 Corchorus capsularis cultivar CVL-1 contig08850, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8018

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
682--794
55
2.1
55
96
0
208
49
7
16
26
1.71
1066--1177
21
5.2
22
69
9
54
55
4
22
17
1.60
3999--4050
14
3.7
14
78
17
54
44
7
11
36
1.70
3999--4055
28
2.1
26
84
12
71
40
7
14
38
1.73
6780--7063
68
4.2
68
86
4
328
25
28
18
27
1.98
6821--7084
134
2.0
132
82
4
323
25
28
18
27
1.98
7828--7857
14
2.1
14
93
0
51
26
13
13
46
1.80

Tables:   1

The End!