Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008830.1 Corchorus capsularis cultivar CVL-1 contig08851, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3241

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1208--1276
30
2.3
30
87
9
104
47
8
15
27
1.75
1269--1328
22
2.7
23
87
5
72
50
8
23
18
1.74
1315--1516
107
1.9
109
93
2
354
52
6
15
24
1.67
1317--1516
54
3.7
54
86
6
264
53
6
16
24
1.66
1702--2101
65
6.3
63
74
14
236
55
6
20
18
1.64
1754--1993
43
5.6
42
80
8
229
55
6
19
18
1.63
1737--2116
22
17.9
20
73
13
232
55
6
19
18
1.63

Tables:   1

The End!