Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008831.1 Corchorus capsularis cultivar CVL-1 contig08852, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18313

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
65--131
30
2.2
31
89
2
100
49
8
16
25
1.74
73--132
30
2.0
30
93
3
102
48
6
16
28
1.71
126--185
22
2.7
23
87
5
72
50
8
23
18
1.74
172--373
107
1.9
109
93
2
354
52
6
15
24
1.67
174--373
54
3.7
54
86
6
264
53
6
16
24
1.66
560--845
64
4.4
64
78
11
241
54
6
20
17
1.65
560--926
22
17.2
21
72
15
233
55
6
20
17
1.64
612--852
43
5.6
42
81
8
240
55
6
20
17
1.63
560--926
21
17.2
22
71
15
256
55
6
20
17
1.64
9973--10001
2
14.5
2
100
0
58
51
0
0
48
1.00
10065--10129
29
2.3
28
76
10
78
47
0
6
46
1.27
14392--14440
24
2.1
23
96
3
89
34
16
12
36
1.86
16326--16351
2
13.0
2
100
0
52
50
0
0
50
1.00

Tables:   1

The End!