Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008834.1 Corchorus capsularis cultivar CVL-1 contig08855, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44397

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13500--13548
2
25.5
2
83
8
66
46
2
2
48
1.25
17241--17269
2
14.5
2
100
0
58
48
0
0
51
1.00
22073--22103
3
10.3
3
100
0
62
32
0
0
67
0.91
27319--27360
21
2.0
21
86
9
59
35
14
42
7
1.73
28395--28426
11
2.9
11
95
0
55
50
9
0
40
1.35
31783--31861
21
3.7
21
79
14
83
56
0
1
41
1.07
31785--31833
25
2.0
25
84
8
64
59
0
0
40
0.98
31801--31852
18
2.7
19
85
11
70
61
0
1
36
1.07
38798--38876
24
3.2
24
77
10
95
15
25
17
41
1.88
38809--38865
30
2.0
28
86
10
80
15
26
21
36
1.93

Tables:   1

The End!