Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008838.1 Corchorus capsularis cultivar CVL-1 contig08859, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42978

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7892--8090
97
2.0
99
88
5
296
24
12
13
49
1.76
17414--17449
15
2.4
15
100
0
72
69
5
0
25
1.10
21306--21586
142
2.0
144
90
4
444
51
3
8
36
1.50
38842--38904
19
3.4
19
70
12
67
20
14
26
38
1.91
38840--38912
37
2.0
37
100
0
146
20
13
24
41
1.89
39424--39448
2
12.5
2
100
0
50
48
0
0
52
1.00
42815--42935
34
3.6
34
88
3
140
16
37
32
14
1.88
42815--42967
32
4.7
33
85
3
184
14
37
35
13
1.85

Tables:   1

The End!