Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008844.1 Corchorus capsularis cultivar CVL-1 contig08865, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19142

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3400--3472
5
13.8
5
95
2
101
83
16
0
0
0.64
5658--5684
13
2.1
13
100
0
54
40
0
59
0
0.98
6121--6630
158
3.2
156
78
10
541
29
14
16
40
1.88
6157--6732
319
1.8
318
80
4
712
29
14
16
39
1.88
7063--7466
111
3.6
112
79
3
429
32
18
19
30
1.95
12273--12310
3
12.3
3
94
5
67
65
2
31
0
1.06
16500--16583
12
7.0
12
75
0
69
4
8
64
22
1.40
16505--16580
15
5.5
15
68
17
56
5
7
64
22
1.40
16721--16767
24
2.1
22
84
11
60
31
14
4
48
1.63
16729--16778
24
2.2
23
82
13
59
30
12
4
54
1.55
18079--18106
2
14.0
2
100
0
56
50
0
0
50
1.00
18865--18898
11
3.1
11
87
12
52
35
0
17
47
1.48

Tables:   1

The End!