Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008847.1 Corchorus capsularis cultivar CVL-1 contig08868, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15559

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4147--4178
3
10.7
3
100
0
64
0
31
0
68
0.90
9090--9118
6
4.8
6
100
0
58
0
17
0
82
0.66
10652--10741
45
2.0
45
95
0
162
24
22
20
33
1.97
15038--15071
6
5.7
6
100
0
68
35
14
50
0
1.44
15432--15497
26
2.5
26
90
0
105
54
10
1
33
1.44

Tables:   1

The End!