Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008853.1 Corchorus capsularis cultivar CVL-1 contig08874, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22713

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2438--2481
17
2.6
17
85
0
61
27
18
36
18
1.94
2820--3208
158
2.5
156
78
9
409
34
19
14
31
1.92
5612--5973
156
2.3
154
79
7
376
34
19
16
29
1.94
7672--8077
185
2.2
185
82
6
475
35
18
16
29
1.93
20415--20452
17
2.2
17
90
0
58
28
2
39
28
1.70
20805--21162
156
2.3
155
79
6
357
33
18
17
30
1.94

Tables:   1

The End!