Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008856.1 Corchorus capsularis cultivar CVL-1 contig08877, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14397

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
875--927
25
2.1
25
92
0
88
64
9
13
13
1.50
973--1019
23
2.1
23
88
4
69
53
2
23
21
1.57
9713--9755
16
2.7
15
89
10
68
30
9
0
60
1.28
13624--13670
13
3.5
13
72
16
51
12
25
0
61
1.31
13731--14180
21
21.1
21
70
16
232
20
21
5
52
1.65
13774--13916
71
2.0
71
91
0
214
21
21
6
50
1.71
13794--13964
36
4.5
36
83
11
227
22
19
5
52
1.67
13994--14034
15
2.9
14
85
7
55
19
17
7
56
1.64
13877--14180
128
2.4
127
81
6
328
20
20
4
54
1.62
13901--14176
85
3.2
85
83
5
335
20
20
4
53
1.63
14278--14397
38
3.2
38
95
0
213
25
16
7
50
1.72

Tables:   1

The End!