Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008858.1 Corchorus capsularis cultivar CVL-1 contig08879, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16089

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4653--4758
2
58.0
2
71
17
61
47
3
0
49
1.19
4654--4697
7
6.3
7
84
7
54
47
2
0
50
1.13
4708--4767
28
2.1
28
100
0
120
38
6
0
55
1.27
4708--4776
28
2.5
28
93
4
106
42
5
0
52
1.25
4653--4821
90
1.9
89
82
8
216
46
3
1
47
1.30
4965--4999
18
1.9
18
88
0
52
42
37
11
8
1.72
6606--6670
19
2.9
24
67
21
68
41
18
29
10
1.84
9621--9649
13
2.2
13
100
0
58
31
0
24
44
1.54
14531--14555
13
1.9
13
100
0
50
32
0
20
48
1.50

Tables:   1

The End!